PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY14833.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

SBP

Protein Properties

Length: 373aa MW: 39990.5 Da PI: 9.115

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY14833.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	125.5	2.2e-39	73	158	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS.........EEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr.........fhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC++dls ak y++rhkvC +hsk+p+v+v+gl+qrfCqqCsr fh l+efD++krsCrrrLa+hnerrrk+ RDY14833.1 73 RCQVEGCKVDLSGAKAYYSRHKVCAMHSKSPTVTVAGLQQRFCQQCSRspfdlslllFHLLTEFDQGKRSCRRRLAGHNERRRKPP 158 6********************************************99999999999************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MSSSSVTKAP LSSSSSTESL DGLKFGQKIY FEDVSVAATT TTTTQGAKTS GGVSSSSSRK 60 GRGGSVQAAQ PPRCQVEGCK VDLSGAKAYY SRHKVCAMHS KSPTVTVAGL QQRFCQQCSR 120 SPFDLSLLLF HLLTEFDQGK RSCRRRLAGH NERRRKPPPS SLLTSRHARL SSPIFDNGGR 180 ASGFLMEFAS YPRLTLRNPL PTPRSTEPVP GNHGATLSWL SSSDTPSEFF LQGSGSGGTS 240 FLSPKHPLVE SYSGVTDSNC ALSLLSSQTW GSRNTQQSVE LNNNLLNFNE TSMTQFTAAS 300 SQVAAAHQLP NAPSWYLKGG DSGNCSPEGV PDLGLGQISP PLHSHLHGEY DVSLQGRRHY 360 MDIGESRACE SSH

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MSSSSVTKAP LSSSSSTESL DGLKFGQKIY FEDVSVAATT TTTTQGAKTS GGVSSSSSRK  60
GRGGSVQAAQ PPRCQVEGCK VDLSGAKAYY SRHKVCAMHS KSPTVTVAGL QQRFCQQCSR  120
SPFDLSLLLF HLLTEFDQGK RSCRRRLAGH NERRRKPPPS SLLTSRHARL SSPIFDNGGR  180
ASGFLMEFAS YPRLTLRNPL PTPRSTEPVP GNHGATLSWL SSSDTPSEFF LQGSGSGGTS  240
FLSPKHPLVE SYSGVTDSNC ALSLLSSQTW GSRNTQQSVE LNNNLLNFNE TSMTQFTAAS  300
SQVAAAHQLP NAPSWYLKGG DSGNCSPEGV PDLGLGQISP PLHSHLHGEY DVSLQGRRHY  360
MDIGESRACE SSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	5e-54	SBP family protein