PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR72090.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 255aa MW: 29496.3 Da PI: 6.126

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR72090.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.5	3.5e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed++l + + G ++W++++++ g+ R++k+c++rw +yl RWR72090.1 14 RGPWTVDEDQKLMNFILNNGIHCWRLVPKMAGLLRCGKSCRLRWTNYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	57	4.5e-18	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++ E+ ++++++ +lG++ W++Ia++++ gRt++++k++w++ RWR72090.1 67 RGPFSEMEENQIIQLHSRLGNR-WSKIAAHFP-GRTDNEIKNHWNT 110 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MGRQPCCEKI GLKRGPWTVD EDQKLMNFIL NNGIHCWRLV PKMAGLLRCG KSCRLRWTNY 60 LRPDLKRGPF SEMEENQIIQ LHSRLGNRWS KIAAHFPGRT DNEIKNHWNT RIKKRLKLLG 120 VEPETHERFE LPEKHDPKDD QLLQHCSWEQ ENNNSEAASL KQEGVGLGLE DTDNLMHGFG 180 ALWDILDMEE MKLEPNPSSS STTALYMEDT CYPNMDESVS LLQGSRPYCY QSVDPLSSWD 240 GLHHLEENFP VGNNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14340.1	1e-77	MYB family protein