PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72167.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YC
Protein Properties Length: 121aa    MW: 13198.2 Da    PI: 5.7517
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72167.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC117.94.5e-372210419100
       NF-YC  19 helPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprde 100
                 h+lPlarikki+k + edvkmis eaP+++skacelfi elt+rsw+ +   krrtl+k d+aaav +tdifdflvd+v  ++
  RWR72167.1  22 HSLPLARIKKIMKkSGEDVKMISGEAPIIFSKACELFIEELTVRSWMVTLRGKRRTLHKEDVAAAVISTDIFDFLVDMVSDSD 104
                 99**********73579*************************************************************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MRQAGTFSGI LSGGISGRTG PHSLPLARIK KIMKKSGEDV KMISGEAPII FSKACELFIE  60
ELTVRSWMVT LRGKRRTLHK EDVAAAVIST DIFDFLVDMV SDSDNQVQDP AASLEDMAVE  120
T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.33e-36NF-YC family protein