PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72180.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 122aa    MW: 14107 Da    PI: 9.5385
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72180.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM77.62.9e-24121222120
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 p G+rF+Ptd+el+ +yL++k+++ +l++ ++ikev++yk++P++L +++ + +e+++yfF+++ +ky      +r+tk+g+ ka   + e+++ ++++
  RWR72180.1  12 PFGYRFRPTDKELL-KYLQRKTDNLPLSC-DIIKEVELYKFDPSELLAQFGSrGEDKCYFFTSTYQKY------RRSTKNGFGKARTGESEIKE-GNNV 101
                 89************.9*************.99**************866655255699*****99988......68999*****99999****9.999* PP

         NAM 100 vglkktLvfykgrapkgektd 120
                 +g+  +Lvfy g++p+ +kt+
  RWR72180.1 102 IGTTISLVFYYGEHPREKKTN 122
                 ******************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MSCGASTSMR VPFGYRFRPT DKELLKYLQR KTDNLPLSCD IIKEVELYKF DPSELLAQFG  60
SRGEDKCYFF TSTYQKYRRS TKNGFGKART GESEIKEGNN VIGTTISLVF YYGEHPREKK  120
TN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27300.13e-22NAC family protein