PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR72285.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 863aa MW: 94361.2 Da PI: 6.7179

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR72285.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.6e-09	684	721	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gL+ +qV++WF N R + RWR72285.1 684 FEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 721 564459******************************88 PP
2	BELL	111.3	5.4e-36	545	613	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + q++ka+Ll ++eeV+ rYkqy++q+q+vissFe vagl +a+pYtslAlka+S+hFrcLk ai++q+ RWR72285.1 545 DFQRRKARLLFMQEEVCSRYKQYHQQMQMVISSFESVAGLSAATPYTSLALKAVSKHFRCLKHAISDQL 613 579***************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 863 aa Download sequence
MNERFETGCL YPTTGFEENS VLGMNSFRPD SHVAQQSRRD KLRVQQAQTP THPNHLLHST 60 AGESVVDPDP VNQVRSIRNL NRLVYDPEAM FSSEMLNFSS AAHVLLAHKD VVSHQELSSG 120 RLVASDVDAP FASDPSPHPV SCSFNTPAKV CDPHNSSYWK DLTSQQHHGC DWVMNCVSGS 180 GSNACNQNPL SVGGIVSSPL IKVGNISSSS PYLRSGYIGF QNAPSTLNAP SSEVSSHDAG 240 RQYEDMSIGS TSFYHNNAFQ EVVTTSSPSM GGSQVIGMDS LVQQDVRGAE HGAWVDGGNE 300 LVLLPSFGTP TTSLQLNNAA TPTTVGAAWI QRSVESDHQW NGGDFLSDRT QGGLAAVAND 360 NSIQGLSLSL SSHTANELQA AQYQEKFGSQ ELPSRPGILN STQSLKANNL GYYYPVSKSL 420 MGNKGYGESV QGAVSSSMDA RRVVGPLGPF TGYATILKSS KFLKPAQQLL DEFCNANGQK 480 LAKSSETSEK SSIDLSASNE AVNVESEVGG RSGTTVVSAS SFFSSTDACG EGPNVRESCQ 540 PYHPDFQRRK ARLLFMQEEV CSRYKQYHQQ MQMVISSFES VAGLSAATPY TSLALKAVSK 600 HFRCLKHAIS DQLLRIGKAL GEELMSAGTS KGEIMPRLKF IDQGFRKQKT SESLSFLDQH 660 QQHIWRPQRG LPERAVSILR AWLFEHFLHP YPTDTDKHML ATQTGLSRNQ VSNWFINARV 720 RLWKPMVEEI HMLETKGTAG VDLNSVKNDR RAFADNGDVD IQTNNAVSDK QSECSTAYPV 780 INTEGRQNPE LWHLDKRTRV DEYQIPSTVD GGLIGFVPYC GGMENVGLGA VSLTLGLRHS 840 AEQQHHQQPL RMHFGGRMVH DLI

Sequence ? help Back to Top

Protein Sequence Length: 863 aa Download sequence

MNERFETGCL YPTTGFEENS VLGMNSFRPD SHVAQQSRRD KLRVQQAQTP THPNHLLHST  60
AGESVVDPDP VNQVRSIRNL NRLVYDPEAM FSSEMLNFSS AAHVLLAHKD VVSHQELSSG  120
RLVASDVDAP FASDPSPHPV SCSFNTPAKV CDPHNSSYWK DLTSQQHHGC DWVMNCVSGS  180
GSNACNQNPL SVGGIVSSPL IKVGNISSSS PYLRSGYIGF QNAPSTLNAP SSEVSSHDAG  240
RQYEDMSIGS TSFYHNNAFQ EVVTTSSPSM GGSQVIGMDS LVQQDVRGAE HGAWVDGGNE  300
LVLLPSFGTP TTSLQLNNAA TPTTVGAAWI QRSVESDHQW NGGDFLSDRT QGGLAAVAND  360
NSIQGLSLSL SSHTANELQA AQYQEKFGSQ ELPSRPGILN STQSLKANNL GYYYPVSKSL  420
MGNKGYGESV QGAVSSSMDA RRVVGPLGPF TGYATILKSS KFLKPAQQLL DEFCNANGQK  480
LAKSSETSEK SSIDLSASNE AVNVESEVGG RSGTTVVSAS SFFSSTDACG EGPNVRESCQ  540
PYHPDFQRRK ARLLFMQEEV CSRYKQYHQQ MQMVISSFES VAGLSAATPY TSLALKAVSK  600
HFRCLKHAIS DQLLRIGKAL GEELMSAGTS KGEIMPRLKF IDQGFRKQKT SESLSFLDQH  660
QQHIWRPQRG LPERAVSILR AWLFEHFLHP YPTDTDKHML ATQTGLSRNQ VSNWFINARV  720
RLWKPMVEEI HMLETKGTAG VDLNSVKNDR RAFADNGDVD IQTNNAVSDK QSECSTAYPV  780
INTEGRQNPE LWHLDKRTRV DEYQIPSTVD GGLIGFVPYC GGMENVGLGA VSLTLGLRHS  840
AEQQHHQQPL RMHFGGRMVH DLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	2e-84	TALE family protein