PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72295.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 213aa    MW: 24003 Da    PI: 5.2386
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72295.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22.1e-1886137256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                 +y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g+
  RWR72295.1  86 CYRGVRRRP-WGKFAAEIRDSTR---QgIRVWLGTFDSAEAAALAYDQAAFSMRGA 137
                 8********.**********322...24*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MDSSFFQYQI SEFSPASSSS GSPSWEGHIP FNENDPEEML LLDLLTSAAR EASEADQFMP  60
TIKIKEEEVN SGRKQDEAKA TMKEKCYRGV RRRPWGKFAA EIRDSTRQGI RVWLGTFDSA  120
EAAALAYDQA AFSMRGATAI LNFPVERVQE SLREMAYCDD GCSPVIALKK RHSMRKKSST  180
RKKKGREPGR IENVVELEDL GVDYLEELLN SSC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1169184KKRHSMRKKSSTRKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-49ERF family protein