PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR72332.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

ERF

Protein Properties

Length: 487aa MW: 53540 Da PI: 6.2941

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR72332.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	61.7	1.6e-19	223	273	2	56
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++ + kl+ge RWR72332.1 223 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDREAFKLRGE 273 59****9.******955...5************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MSESTSSMQQ GKGKGNRDGQ KVKVNDEGGD RGFPEPMERP QWKPVFEAAP LSLRPLKKSR 60 SPDDDQSPSG SSSSTISMSQ PQQIAEHPPL PLSTDASASA NTIPLASSRM PFPFACEVSQ 120 SQQQQQEEAI NMHYQLRTAA LPLPFANPQQ YQQQQQMISF SHHQQQHFQQ MAAYQQQQLL 180 QYWSETLNLS PRGHMMMMNR IGQDSGGRPL TLFRPTATST NKLYRGVRQR HWGKWVAEIR 240 LPRNRTRLWL GTFDTAEEAA LAYDREAFKL RGENARLNFP HLFLGRGGES NNNSSSSSSS 300 SSTPHNVSQP IQQRGRRGQQ QAAPVTLPPS QSNNQGPDES NLQGQSPPSD ESGSGSGEVA 360 VIEENKQQQQ QPLAANVAQG GLPQSQELVW GDMEEAWFNN IPAAWGPGSP VWDDLVDPND 420 LLQSHFSGYH YPVPATVPKS EMDCSTSSSS VVQMPQTMST ASASSSSLAP VSASSSSPTM 480 NFFSWGE

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MSESTSSMQQ GKGKGNRDGQ KVKVNDEGGD RGFPEPMERP QWKPVFEAAP LSLRPLKKSR  60
SPDDDQSPSG SSSSTISMSQ PQQIAEHPPL PLSTDASASA NTIPLASSRM PFPFACEVSQ  120
SQQQQQEEAI NMHYQLRTAA LPLPFANPQQ YQQQQQMISF SHHQQQHFQQ MAAYQQQQLL  180
QYWSETLNLS PRGHMMMMNR IGQDSGGRPL TLFRPTATST NKLYRGVRQR HWGKWVAEIR  240
LPRNRTRLWL GTFDTAEEAA LAYDREAFKL RGENARLNFP HLFLGRGGES NNNSSSSSSS  300
SSTPHNVSQP IQQRGRRGQQ QAAPVTLPPS QSNNQGPDES NLQGQSPPSD ESGSGSGEVA  360
VIEENKQQQQ QPLAANVAQG GLPQSQELVW GDMEEAWFNN IPAAWGPGSP VWDDLVDPND  420
LLQSHFSGYH YPVPATVPKS EMDCSTSSSS VVQMPQTMST ASASSSSLAP VSASSSSPTM  480
NFFSWGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20880.1	2e-43	ERF family protein