PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR72392.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

CPP

Protein Properties

Length: 592aa MW: 66224.2 Da PI: 8.7575

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR72392.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	46.5	7.4e-15	199	235	3	39
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 +k+CnC+k+kClk+YC+Cf+ag++C+e C+C++C+N+ RWR72392.1 199 CKRCNCRKTKCLKLYCDCFNAGEYCTEPCTCKNCFNR 235 89**********************************7 PP
2	TCR	50.5	4.1e-16	285	323	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gC+Ckks+ClkkYCeC++ g+ Cs+eC+Ce+CkN RWR72392.1 285 RHKRGCTCKKSRCLKKYCECYKVGVGCSSECRCEGCKNV 323 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MQEAGQKQQS MRRHLHFEVE GAYKKSIGNN DNSWNSINIV PNVRTPSSPM GLEATGLFHA 60 NSYTISNNKQ AANFSPYSPS GSSFCQLEML ETHTNNVDTS VRNNRSSSMP SGIGLHLNSI 120 VSNCGSNTQL ARKDSFNSSR EKILSGNKQP MLEDSEGWLV EYEKQMPISQ DAYRLEEFNQ 180 RSPKKKRNRD NNTFENEGCK RCNCRKTKCL KLYCDCFNAG EYCTEPCTCK NCFNRPVYED 240 TVLDIRQQIE SRNSLAFAPK IVQCGQESPQ NSGEDSNQKT PASARHKRGC TCKKSRCLKK 300 YCECYKVGVG CSSECRCEGC KNVFGKKEEM EHIKLGDKRW EDASDGKMRI DISQPEQSHS 360 DVSSLTPMFQ LSNHGRAVPK SQHPTRRHLA STPESQVLSP SEMSPQSPQT SDGNYSLMNV 420 RGSPGLVLHD QELDYQIGKE VYPLSPRWDG LSDIHDLTSL LNYPLSRASS SKALRPELSQ 480 ESGSSSHGSL HWRNSPMIPN VHFSGNKFVT DPGSNNKLYN VPEDETPHIL KETCSPKKAV 540 KTSSPNKKRV SPPHNCLHEL RGSSSSPSLR GGRKFILQSV PSFPHSVKLK KV

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MQEAGQKQQS MRRHLHFEVE GAYKKSIGNN DNSWNSINIV PNVRTPSSPM GLEATGLFHA  60
NSYTISNNKQ AANFSPYSPS GSSFCQLEML ETHTNNVDTS VRNNRSSSMP SGIGLHLNSI  120
VSNCGSNTQL ARKDSFNSSR EKILSGNKQP MLEDSEGWLV EYEKQMPISQ DAYRLEEFNQ  180
RSPKKKRNRD NNTFENEGCK RCNCRKTKCL KLYCDCFNAG EYCTEPCTCK NCFNRPVYED  240
TVLDIRQQIE SRNSLAFAPK IVQCGQESPQ NSGEDSNQKT PASARHKRGC TCKKSRCLKK  300
YCECYKVGVG CSSECRCEGC KNVFGKKEEM EHIKLGDKRW EDASDGKMRI DISQPEQSHS  360
DVSSLTPMFQ LSNHGRAVPK SQHPTRRHLA STPESQVLSP SEMSPQSPQT SDGNYSLMNV  420
RGSPGLVLHD QELDYQIGKE VYPLSPRWDG LSDIHDLTSL LNYPLSRASS SKALRPELSQ  480
ESGSSSHGSL HWRNSPMIPN VHFSGNKFVT DPGSNNKLYN VPEDETPHIL KETCSPKKAV  540
KTSSPNKKRV SPPHNCLHEL RGSSSSPSLR GGRKFILQSV PSFPHSVKLK KV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	4e-67	CPP family protein