PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72484.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 232aa    MW: 25457.5 Da    PI: 4.7521
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72484.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.7e-1865114255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  RWR72484.1  65 IYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFSTPEMAARAHDVAALSIKG 114
                 69****998.**********843...6**********************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MADVTNLEAV QSSSTSMSAS PSSSCSSTSS LLLQSSHTDQ SEEPKSDEPE AKRSKRVRDC  60
SKHPIYRGVR MRNWGKWVSE IREPRKKSRI WLGTFSTPEM AARAHDVAAL SIKGDSAVLN  120
FPELAESLPR PATLSPRDVQ AAAAKAAAME LLASPPLASA STPPDELSEI VQLPRLSPSH  180
DSPESQNEMV FADVFDNWLF DRSPWMENGF FGDSLAMPEC LIPTSFESCL WD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-54ERF family protein