PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR72522.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 613aa MW: 67535.7 Da PI: 6.5992

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR72522.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.3	1.3e-08	538	576	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA + gLt +qV++WF N R + RWR72522.1 538 MFQNflHPYPKDAEKHALAIRSGLTRNQVSNWFINARVR 576 5887779******************************88 PP
2	BELL	65.1	1.4e-21	410	480	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r+el+ kka Ll +l+ +d+rY+ + +q+++v +F+++++ ++ ++++++Al+++S ++ L+++i++ i RWR72522.1 410 QRKELETKKAELLAMLQVIDRRYEECLNQIRVVTFAFHVATESDP-QLHARFALQRVSGLYKRLRERITNEI 480 689****************************************.********************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
MESDMFNASL PIADQTPMVI DATASQLFPG SFVPPDLNSQ RPIVAGYSLF SNLQAEPIHN 60 LHVANHGGMG DGEASVSANI AFGRHSIRNS SVNSSVSDAH FRENFMGGSL PATSIANLLA 120 ASTSLHENFI GLPISAAPAL PFADMRTLVS HDGCQTTSNS SLSTSVNCPD DGSRGDIDLL 180 APRKDSVVNY NDIMDHQTFF GKNPLNVVCP SYHVSGNSQS PWISNKPDAT NPPYGYYIRS 240 NELSLSLATC TPPLIDMPTI PDQCSEISCS GVTQITGKDN RYADTGELQI CSRVLPHSFH 300 NIGQGSEQTS TDSKEPSLDC GSYRQFQFSH VLLGSKYLHV AQQILAEVAS YALENQVNLS 360 NSADGIQSDG KPSFSSSYSG GRGVLMMGSG EFTLSSGDAK SEGRMKLMLQ RKELETKKAE 420 LLAMLQVIDR RYEECLNQIR VVTFAFHVAT ESDPQLHARF ALQRVSGLYK RLRERITNEI 480 LLAGECLSSD FIREKEQSFE SSFIQKQWAL QQLRNDPQSW RPQRGLPEKS VSVLRAWMFQ 540 NFLHPYPKDA EKHALAIRSG LTRNQVSNWF INARVRLWKP MIEEMYSEIN KKGRADGAAS 600 DRRSHGITGD QRA

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

MESDMFNASL PIADQTPMVI DATASQLFPG SFVPPDLNSQ RPIVAGYSLF SNLQAEPIHN  60
LHVANHGGMG DGEASVSANI AFGRHSIRNS SVNSSVSDAH FRENFMGGSL PATSIANLLA  120
ASTSLHENFI GLPISAAPAL PFADMRTLVS HDGCQTTSNS SLSTSVNCPD DGSRGDIDLL  180
APRKDSVVNY NDIMDHQTFF GKNPLNVVCP SYHVSGNSQS PWISNKPDAT NPPYGYYIRS  240
NELSLSLATC TPPLIDMPTI PDQCSEISCS GVTQITGKDN RYADTGELQI CSRVLPHSFH  300
NIGQGSEQTS TDSKEPSLDC GSYRQFQFSH VLLGSKYLHV AQQILAEVAS YALENQVNLS  360
NSADGIQSDG KPSFSSSYSG GRGVLMMGSG EFTLSSGDAK SEGRMKLMLQ RKELETKKAE  420
LLAMLQVIDR RYEECLNQIR VVTFAFHVAT ESDPQLHARF ALQRVSGLYK RLRERITNEI  480
LLAGECLSSD FIREKEQSFE SSFIQKQWAL QQLRNDPQSW RPQRGLPEKS VSVLRAWMFQ  540
NFLHPYPKDA EKHALAIRSG LTRNQVSNWF INARVRLWKP MIEEMYSEIN KKGRADGAAS  600
DRRSHGITGD QRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	1e-90	TALE family protein