PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72547.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family CPP
Protein Properties Length: 164aa    MW: 18597.2 Da    PI: 8.4282
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR39.98.4e-1380118341
         TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                 + +C Ck+skCl +YC Cf +gk+C+e C C+dC+N ++
  RWR72547.1  80 CTRCLCKNSKCLMLYCACFVSGKYCAEGCGCQDCHNISN 118
                 679*********************************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MDDSENEELM QQMAMQMFLR RWNRTGNGDG GESLMRRVVP LTTSPRLIVS QAMSTRSSSI  60
PIRDVRSWER NPNTFKNEGC TRCLCKNSKC LMLYCACFVS GKYCAEGCGC QDCHNISNNE  120
EMIHGIRQQI ESRNPHAFRR KVVKHATESS QSSGQLAPIP PNIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22780.14e-22CPP family protein