PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72613.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family LBD
Protein Properties Length: 109aa    MW: 12614.6 Da    PI: 8.1158
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72613.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601253.7e-3951051101
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 aCaaC +l+r+C++dC+lapyfp ++p++f+n+h+lFG+sn+l++l++l+++++ dam+s+v++A++r r Pv+G++g+i +lq +++q +++l+++++
  RWR72613.1   5 ACAACNYLQRECTADCPLAPYFPPDRPQQFQNAHRLFGVSNILNILEQLDPSQKMDAMRSIVFQADIRKRYPVHGCLGIICQLQVRIRQFQQQLDEVNA 103
                 7**********************************************************************************************9998 PP

      DUF260 100 el 101
                 +l
  RWR72613.1 104 QL 105
                 75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MKSEACAACN YLQRECTADC PLAPYFPPDR PQQFQNAHRL FGVSNILNIL EQLDPSQKMD  60
AMRSIVFQAD IRKRYPVHGC LGIICQLQVR IRQFQQQLDE VNAQLSIYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47870.13e-38LBD family protein