PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72666.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C2H2
Protein Properties Length: 277aa    MW: 30526.6 Da    PI: 8.3363
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72666.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.94.2e-06249271223
                 EETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                 +Cp C++ F++ ++L++Hi + H
  RWR72666.1 249 VCPMCSRGFRDADSLVQHIDRdH 271
                 7******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MGTPEFPNLG KHCSVEDCNL LDFLPFTCDR CKQVFCSKHR SYMNHSCTRA SLQDVTVQVC  60
PHCAKGVRMF PYEDPAITWN SHINTDCDPS NSQKGTNKRR CPAPRCREIL SLSNTIRCRD  120
CAIEHCLKHR FGPDHNCPGP KKPDAGFPFI GLLSRSQKDE SRLTTPNSSG ALPLWTTKFL  180
SSSMAKLSTA TTQALQKAKD GMAQNNSGVV EECVQCRARF SAVTDLIEHV KRFHGGGGRA  240
GPNKVTIDVC PMCSRGFRDA DSLVQHIDRD HGGASDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-108C2H2 family protein