PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72693.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 404aa    MW: 44297.2 Da    PI: 6.6731
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72693.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.41.1e-12332377655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR+ri +++ +L el+P+     +k  +K+++L +AveY+k Lq
  RWR72693.1 332 SIAERVRRSRISERLKKLEELVPNM----DKQTNKSDMLDLAVEYVKGLQ 377
                 689*********************7....688****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MDSNLQHHHH HQQQQQQQQQ QMSSGLMRYR SAPSSLFADF IDDVGEGCDG FLGRSSSPEV  60
ETLLERFITS NNGDSAASPD ILDIDEKQVI SETNTQFMAT MEEQSRISSK SPMISQREQL  120
HIGSFANGAV IGSSSSVVNT VAIDSAQVKT SSNSSNLVRH SSSPAGFFSH LTVENGYAAR  180
DPCNFRVGNG SNGETASTSR LRNQTNFISK KASFPGMSSN ISDMGTENMK VSISEGGSLG  240
NANNSSMCYI PGYPISSWDN PPRGNNMTGL KRIRDYGKMT PEPGNRASGL SHQFSFPLTS  300
AEMDSMEEFL EFEDSVPCNT RAKRGCATHP RSIAERVRRS RISERLKKLE ELVPNMDKQT  360
NKSDMLDLAV EYVKGLQKQV KNLMDDRASC TCSPKLKPDP SPAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-64bHLH family protein