PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR72935.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 202aa MW: 22929.2 Da PI: 6.7816

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR72935.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.8	6e-30	105	163	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk+s++pr+YYrC+ gC+vkk++er++ed ++v++tYeg Hnhe RWR72935.1 105 LDDGFKWRKYGKKTVKNSPNPRNYYRCSNGGCSVKKRIERDREDRNYVITTYEGVHNHE 163 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MSSNPPQSPF SLNLPNYGFS AHNQDHPSFQ LSDYLIDDCS DESVTPAVTS SSPNPMFENY 60 HYSNQFSSTD PGSSTMSTDY GVMKKIKLES GFRIAFRTKS ELENLDDGFK WRKYGKKTVK 120 NSPNPRNYYR CSNGGCSVKK RIERDREDRN YVITTYEGVH NHESPTVIYC TPHQNLTVTS 180 SDTSPLEVPQ PWSLQQPAYS QV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	2e-39	WRKY family protein