PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR72986.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 202aa MW: 23216.2 Da PI: 9.2061

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR72986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103	1.7e-32	126	184	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ RWR72986.1 126 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHIHS 184 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MYNQSLLEDQ EGMVTSNVGF HTNNFSCGWT HPQLAFQQLK SLNNPSSMGE DLACHLNGSQ 60 LGTSSIQRAS AILWPWGEMG EGLGSKRQTG ENNLAIAAMK MKKVKARRKV REPRFCFKTM 120 SDVDVLDDGY KWRKYGQKVV KNTQHPRSYY RCTQDNCRVK KRVERLAEDP RMVITTYEGR 180 HIHSPWHDVD DSNASSQLDF IW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	2e-50	WRKY family protein