PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR73109.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 248aa MW: 27910.6 Da PI: 9.5891

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR73109.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.3	4.5e-51	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+e+d++k++P+dLp +++e yfF++r+ ky++g+r+nrat sgyWkatg dk+++++ +++ RWR73109.1 14 LPPGFRFHPTDEELVVQYLKRKVFSCPLPA-SIIPEIDVCKFDPSDLP---GDSNQERYFFTTREAKYPNGNRPNRATGSGYWKATGLDKRIVTSrSNQ 108 79**************************.89***********...3467899****************************999885777 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk+Lvfy+g+ap+g++tdW+mheyrl RWR73109.1 109 VVGMKKVLVFYRGKAPNGSRTDWIMHEYRL 138 8*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MEKMSFVKDG VVRLPPGFRF HPTDEELVVQ YLKRKVFSCP LPASIIPEID VCKFDPSDLP 60 GDSNQERYFF TTREAKYPNG NRPNRATGSG YWKATGLDKR IVTSRSNQVV GMKKVLVFYR 120 GKAPNGSRTD WIMHEYRLAD AAGGRGCIVP QRKNSTQNAM MQMEDWVLCR IFLKKRSEKT 180 DVEITQPSNN YRSRNLGVPR ISFIDFMGRE AAASSDSSSI TEISSAGPRN EEINSCNSFS 240 SSPCGREA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	6e-88	NAC family protein