PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR73350.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 159aa    MW: 18748.3 Da    PI: 8.709
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR73350.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.32.4e-09211322127
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra...tksgyWkatgkdkevlskk 96 
                   Gf+F Pt e+ + +  ++k +g++l+   +++e  ++++++P++L+        e+y F+  +     g++ nra    ++ yWk+  k + v++ +
  RWR73350.1  21 FIGFHFLPTYEDGI-RIVNNKNAGRELPP--IFNEYrRLFQCQPKQLE--------ECYCFTDVAVI---GNKVNRAlgeDSRYYWKNINK-EFVKDDN 104
                 68************.77999999999777..5666669*********6........89***998775...556666522145789**9877.6777779 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyr 127
                 ++++g+ + Lv++k    k + t+W + eyr
  RWR73350.1 105 NTVIGCVTKLVLHKD---KNTPTEWHILEYR 132
                 999**********43...3356********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MASRRNAFSS MIDHRLNPDL FIGFHFLPTY EDGIRIVNNK NAGRELPPIF NEYRRLFQCQ  60
PKQLEECYCF TDVAVIGNKV NRALGEDSRY YWKNINKEFV KDDNNTVIGC VTKLVLHKDK  120
NTPTEWHILE YRDRKTADAG RWVLCQIYKR EKNNDNVTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.11e-06NAC family protein