PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR73447.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 309aa    MW: 33721.8 Da    PI: 6.9409
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR73447.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.10.000372062441255
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  RWR73447.1 206 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 244
                 6678889999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MNRGVLQSSP VQQMMTGNLN WWNINNMRPP PQQPSHLLPP TSSPLFPQYP PPTSLPLGSL  60
NENQDLPEQS WSQLLLGGLV GEEDRCSFSH LQAKKMESCE EPMLFSSSSS HIVDVKQERS  120
ESGYGYGHGN EEYQAVRSPW GQVLPASSPR SCVTGFSSNI LDFASSKVEG SHPQPDHSPE  180
YNSTVNGPAF KKAKVQSSAH STFKVRKEKL GDRITALHQL VSPFGKTDTA SVLLEAIGYI  240
RFLQSQIEAL SSPYMASGSG SMKQPDAKDE PKKDLRSRGL CLVPVSCTLQ VGSDNGADYW  300
APTLGGGFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.13e-56bHLH family protein