PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR73467.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 162aa    MW: 18470.4 Da    PI: 4.3602
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR73467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.60.0001326621354
                HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                R ri + +e L++l+P++     +  +  +iLe++ +Y+  L
  RWR73467.1 26 RTRIAQQIEALQSLIPNS-----TGTDERSILEETRDYLLRL 62
                99***************8.....34556679*****999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MDLSENRSFS DDSDDEDSLH ENGRPRTRIA QQIEALQSLI PNSTGTDERS ILEETRDYLL  60
RLHRESEEIE KELAAAPSSS RSQGEEDASQ GPHILQVETE ELMEGRFVVK MEWRKRDGVG  120
GHVQRVIEGL DLRMISIVVN EKNPDVMSST AFVEVISQHY YL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.19e-07bHLH family protein