PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR73520.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 339aa    MW: 36993.6 Da    PI: 8.8678
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR73520.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.51.7e-14101145347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + ++lG+g+W+ Iart    Rt+ q+ s+ qky
       RWR73520.1 101 PWTEEEHRRFLVGLQKLGKGDWRGIARTYVVSRTPTQVASHAQKY 145
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPT KGGPKLFGVR LMDGPMKKSA SMGNLSSAHY LSSSSSPNPS  60
SPSSDPLRDP NPALAQGYVS DDPAHASCSS NCRAERKKGT PWTEEEHRRF LVGLQKLGKG  120
DWRGIARTYV VSRTPTQVAS HAQKYFIRQN NSGRKKRRSS LFDMVPDRSS DAHPVLEEQF  180
GLPSSATETE EINRVPSLSL ALDRGCEPME STLDNHPVKP EETIACSQLP PVVPAFIPAY  240
VPFLYPFWPP NLPLAGEERK ETHQILRPIP VHSKNPANVD DLASMSKLSL REAVAGRIEP  300
SALSLELHGA PSRQSAFHAN STVGGSELNQ SNGNIIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.14e-91MYB_related family protein