PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR73635.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family TCP
Protein Properties Length: 199aa    MW: 22212.1 Da    PI: 9.263
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR73635.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP103.92.6e-32281724134
         TCP   4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg.....kaaksa 94 
                  + rhski T++g+RdRR+Rls+++a +fF Lqd+LGfdk+s+t  WL+ ++k+ i el++  s+    c    ++ ++ +++    g     ++ +++
  RWR73635.1  28 NRERHSKIFTAQGLRDRRMRLSIDVACEFFSLQDMLGFDKASETMSWLMMKSKTTINELAKGLSQ-RDVCdgdGDGGENWTSEY---GdisglDETTAN 122
                 689*********************************************************99333.336654322222222222...134455222222 PP

         TCP  95 akskksqksaasalnlakesr..........akarararertrekmrikn 134
                  k+++++ +++s  +  k               a++  rert ekm ++ 
  RWR73635.1 123 VKPQEKDLKQKSLVAAPKVNGnegskkgmiyPAAKESRRERTGEKMIKRL 172
                 2222222222222222221113445677888566666699******8875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MDVLGASQKT FCSKKSSPVA VGRNRSSNRE RHSKIFTAQG LRDRRMRLSI DVACEFFSLQ  60
DMLGFDKASE TMSWLMMKSK TTINELAKGL SQRDVCDGDG DGGENWTSEY GDISGLDETT  120
ANVKPQEKDL KQKSLVAAPK VNGNEGSKKG MIYPAAKESR RERTGEKMIK RLDNSNQLFQ  180
LLGVEINEPN CHDLSRSRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.28e-22TCP family protein