PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR73650.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

HSF

Protein Properties

Length: 363aa MW: 41135.3 Da PI: 4.7401

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR73650.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.6	2.2e-34	36	126	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+++++ed++++ ++ ws+ nsf+v+d+++fa+++LpkyFkhsnf+SF+RQLn YgF+kv+ ++ weF+++ F +g+k+ll++ik RWR73650.1 36 FLTKTFDMVEDPATDLIVAWSRARNSFIVWDSHKFATNLLPKYFKHSNFSSFIRQLNAYGFRKVDPDR---------WEFANEGFLAGQKHLLRNIK 123 9**************************************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r++ RWR73650.1 124 RRR 126 *96 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MEGVKVKVED MGGSSSSPTL SPQPMEGLHD AGPPPFLTKT FDMVEDPATD LIVAWSRARN 60 SFIVWDSHKF ATNLLPKYFK HSNFSSFIRQ LNAYGFRKVD PDRWEFANEG FLAGQKHLLR 120 NIKRRRYVSQ NMQQQEMAAC VELGEFELEG ELEQLRRDRN VLMVEIVKLR QQQKTSQAQL 180 VAMEERWLGT ERKQQQMMAF LARALKNPAF VQRLIQCHER QKELGSTGRK RRLPTNGCSE 240 NLQQEVISQV GSQIVSYAQK EQEETAIETD IDTVFSAIDH SASNSIGNQN AKMIAGSSDP 300 KLDYASDLIW DDLLNEHFVV GDEVGGDQAE IDVEVEDLAE KPSEWGDDVQ VLVEQMGFLV 360 PSP

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MEGVKVKVED MGGSSSSPTL SPQPMEGLHD AGPPPFLTKT FDMVEDPATD LIVAWSRARN  60
SFIVWDSHKF ATNLLPKYFK HSNFSSFIRQ LNAYGFRKVD PDRWEFANEG FLAGQKHLLR  120
NIKRRRYVSQ NMQQQEMAAC VELGEFELEG ELEQLRRDRN VLMVEIVKLR QQQKTSQAQL  180
VAMEERWLGT ERKQQQMMAF LARALKNPAF VQRLIQCHER QKELGSTGRK RRLPTNGCSE  240
NLQQEVISQV GSQIVSYAQK EQEETAIETD IDTVFSAIDH SASNSIGNQN AKMIAGSSDP  300
KLDYASDLIW DDLLNEHFVV GDEVGGDQAE IDVEVEDLAE KPSEWGDDVQ VLVEQMGFLV  360
PSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-105	HSF family protein