PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR73777.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB
Protein Properties Length: 326aa    MW: 36208 Da    PI: 5.3776
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR73777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.51.7e-141764148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l ++    G g+W+ +ar  g+ R++k+c++rw +yl
       RWR73777.1 17 KGLWSPEEDDKLMNYMLTNGQGCWSDVARNAGLQRCGKSCRLRWINYL 64
                     678*******************************************97 PP
2Myb_DNA-binding50.83.7e-1670113146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E++l+v+++  lG++ W+ Ia++++ gRt++++k++w++
       RWR73777.1  70 RGAFSPQEEDLIVHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 113
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MRKPDQPAKN NPTKLRKGLW SPEEDDKLMN YMLTNGQGCW SDVARNAGLQ RCGKSCRLRW  60
INYLRPDLKR GAFSPQEEDL IVHLHSILGN RWSQIAARLP GRTDNEIKNF WNSTIKKRLK  120
NSSSSSSSPK SDYSEPQEAM GGFTSINDHD IMAMCMDSSS SSTSVQPVAL CNQLSPLPRF  180
ENTCDVNGTS FASGYYHMPP CLTQVGVESG FYGDHGIYQS GLMRAGGELL VPPLVSISSE  240
DNTITNNNSG NYTNDNHNSR NSNYINTITT TPTTTATTNN NNNNKGDDMV GNGNYWGGEN  300
IRMGEWDLDD LMGDISSFPF LDFQVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.14e-70MYB family protein