PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR73793.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 378aa    MW: 41196.9 Da    PI: 5.7054
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR73793.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.4e-08228275455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++iN ++  L+el+P +    +k    a +L + +++++sLq
  RWR73793.1 228 SHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQSLQ 275
                 8*************************9....888999999999999999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MELPRSSKSG SGNCGDFAPE MAETLQFTEE ILSLMAETDL QQQSFDSPPE NGSSFTALLE  60
LPTNQAIELL HEPGTVNRQA IGSSGSWRDP PADQKQVAFS SFNCAPTFPS NAALVERAAR  120
FSIFAAKESA AAQTSSDPSN GREISSVKLK AEPADSDPCL NSSPNFASTA AKQRSGKRKG  180
VENSKVKAPA KRSKNVEDGS SKTGEEIKGS EKLPYVHVRS RRGQATDSHS LAERARREKI  240
NARMKLLQEL VPGCNKISGT ALVLDEIINH VQSLQRQVEF LSMRLAAVNP RIDFSSLNSF  300
FTTDNGDLAT GDLASMVAMD PLLWSQLLVD GAGRHQQQFW HSDLSPWRRD DNNAFITPEP  360
MLLDYNSTDS GKEIAQHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.22e-76bHLH family protein