PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR73818.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 430aa MW: 48038.8 Da PI: 6.8752

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR73818.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.3	5.4e-31	256	310	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LH+rFve v++LGG++kAtPk i+++mk +gLt+ hvkSHLQkYR+ RWR73818.1 256 KTRIRWTTDLHDRFVESVNRLGGPDKATPKGIVKMMKYDGLTILHVKSHLQKYRI 310 68****************************************************7 PP
2	Myb_DNA-binding	45.2	2.2e-14	260	309	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWTt++++++v+ v++lGg+ t+k I ++m g+t ++ks++qky+ RWR73818.1 260 RWTTDLHDRFVESVNRLGGPdkaTPKGIVKMMKyDGLTILHVKSHLQKYR 309 9************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MNTHKFVFHQ DKHDSFTNHY SLDIPNHTFQ NLGSRQLWNR GVCFQSPSPE DLIHQIVLQR 60 HNSVEGGSLQ PEIMPANPSC SPLSCFQSQS TPFYPGFPPC VYQFGPLPLT PQFSPRHSTD 120 FPSHGPSEAT SPVTLTKQGN LVSHASNTLQ PVLKLPSYGN QDSRASSSCG GIDSTCFQGR 180 EFLPFVQSQM TGDDAILDRR CLSSAEGTPN PTVVSNPFSS TITQSNFQPT PEKQPPKPSG 240 GVTSGNVSPR AAVPNKTRIR WTTDLHDRFV ESVNRLGGPD KATPKGIVKM MKYDGLTILH 300 VKSHLQKYRI AKSIPDSPEA NCERRTSVND NPQLDQKDGM NSIEALRMQL DVQRLLNEQL 360 DAQRKLQMQI EAQGKQLEKM IQQQQETRRY LLETQNLDML FSDEQPVITE DVQALEVEGF 420 DNTHFPSKIS

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MNTHKFVFHQ DKHDSFTNHY SLDIPNHTFQ NLGSRQLWNR GVCFQSPSPE DLIHQIVLQR  60
HNSVEGGSLQ PEIMPANPSC SPLSCFQSQS TPFYPGFPPC VYQFGPLPLT PQFSPRHSTD  120
FPSHGPSEAT SPVTLTKQGN LVSHASNTLQ PVLKLPSYGN QDSRASSSCG GIDSTCFQGR  180
EFLPFVQSQM TGDDAILDRR CLSSAEGTPN PTVVSNPFSS TITQSNFQPT PEKQPPKPSG  240
GVTSGNVSPR AAVPNKTRIR WTTDLHDRFV ESVNRLGGPD KATPKGIVKM MKYDGLTILH  300
VKSHLQKYRI AKSIPDSPEA NCERRTSVND NPQLDQKDGM NSIEALRMQL DVQRLLNEQL  360
DAQRKLQMQI EAQGKQLEKM IQQQQETRRY LLETQNLDML FSDEQPVITE DVQALEVEGF  420
DNTHFPSKIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	7e-58	G2-like family protein