PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR73975.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 350aa MW: 39466 Da PI: 7.4941

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR73975.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49	1.4e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ ++q G+g +W + ++++g++R++k+c++rw++yl RWR73975.1 14 KGPWSPEEDAKLKAFIEQNGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	31	5.7e-10	69	124	2	46
SSS-HHHHHHHHHHHHHTTTT............-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg............tWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ RWR73975.1 69 GGFSEEEDNIICSLYISIGSRqavflsfnssmtLWSIIAAQLP-GRTDNDIKNYWNT 124 569**************************************.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKAFIE QNGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRQ AVFLSFNSSM TLWSIIAAQL PGRTDNDIKN 120 YWNTRLKKKL FGKQRKEHQA RRICGLNQEV KRESQNSMIP EQDGQNSYYP QPPLALPVPH 180 PNQDPHLSDH TAIRKLLLKL GGRFSDDYDG ANLQRPLHTS TTQFPYQNSI NLASSSSSVN 240 FFPNPYYSTP QDGQYYTDDV FMHHILQGSS GERGELQEMD YRNAQRFEEL DCFCGTSVVN 300 EGNGTNSTES TSWGDGGSLP FPPSVSNYDY YQHGMLQESV VGDSKYPTSQ

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKAFIE QNGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRQ AVFLSFNSSM TLWSIIAAQL PGRTDNDIKN  120
YWNTRLKKKL FGKQRKEHQA RRICGLNQEV KRESQNSMIP EQDGQNSYYP QPPLALPVPH  180
PNQDPHLSDH TAIRKLLLKL GGRFSDDYDG ANLQRPLHTS TTQFPYQNSI NLASSSSSVN  240
FFPNPYYSTP QDGQYYTDDV FMHHILQGSS GERGELQEMD YRNAQRFEEL DCFCGTSVVN  300
EGNGTNSTES TSWGDGGSLP FPPSVSNYDY YQHGMLQESV VGDSKYPTSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-81	MYB family protein