PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR74069.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 336aa    MW: 38005.9 Da    PI: 4.8167
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR74069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.32e-11169213554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 + ++ErrRR+r+N++++ Lr+++P  +      Kl+  +iL  +++Y+k+L
  RWR74069.1 169 NLMAERRRRKRLNDRLSMLRSVVPRiS------KLDRTSILGDTIDYMKEL 213
                 5589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MELDEHGFLE ELLALRSQTW NSFSPEMSEF FACGESFDCF QNIQDNPSLA SQHEHLSSNG  60
LAFTGLPAFD YPMNDIYCPY GDGFSFTETD QSAKEHNNAP FPFQEDCTLL TEDHDVSLPC  120
DDLRNSLKKQ RICKVELPRE PEIPTFQPAS LGRQSQDQAK KLEGRPSKNL MAERRRRKRL  180
NDRLSMLRSV VPRISKLDRT SILGDTIDYM KELLDRIKIL QEEIQLGSNQ LNVLSNCNNV  240
KSSEIVVRNA PKFDAERKNT DTRIEVCCSS KPGLLLSTLT TLDALGLEVE QCVISCFNDF  300
GMQASCSEKL EQRAIVSPEE IKQALFRNAG YGGRCV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173180ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.18e-69bHLH family protein