PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR74131.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GATA
Protein Properties Length: 328aa    MW: 35582.8 Da    PI: 8.4762
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR74131.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA44.52.1e-14212247134
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C++Cgt+   +p+ Rrgp+g+ tLCnaCGl ++ kg
  RWR74131.1 212 CQHCGTSLafSPMTRRGPSGPATLCNACGLTWANKG 247
                 *******999***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MSQTNFQPLI PSGPPQDDQN QNQFSQAAVI GGFMAPVAGD RGDVLTAAPV AGLGVGAAVD  60
VEDFDGSNQT VNLQGAGVGP LVITYNESVF RFPSIEPEKV QAVLLLLGGR VMPSTVPSVV  120
GSRHLKSMEK DAQRLSNASV RQASLNRFRE KRKERCFDKK IRYDVRQEVA LRMQRKNGQF  180
APKETTEEVV SASSGFNSSE SLRENTRQIT ECQHCGTSLA FSPMTRRGPS GPATLCNACG  240
LTWANKGIMR DLSKASTMEI QNPSADTKAQ DLDNFWAEFS EALANDNRRS SVNATPIEQR  300
SSAINSNKGN SNQASKYAFL YATPSNQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.23e-57GATA family protein