PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR74200.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Protein Properties

Length: 381aa MW: 43808.7 Da PI: 9.8561

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR74200.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.2	2.3e-16	42	132	1	100
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ffk + ++++ l+lp f+++ +g+k + + +l+++ g+sW vk+ ++++ ++++GW +Fv+ ++L+ g+ +vF++dg++ f +v++f+k RWR74200.1 42 FFKFM--LPGFSQK-LSLPPAFLKHLMGEK-C-DKAILKSSLGKSWHVKV--CGGKACKWFGDGWFDFVQWHDLQIGECLVFRYDGDMVF--YVTIFDK 131 56666..5566665.******6666663.4.499**********..666666789*************************..***98 PP S CS B3 100 s 100 s RWR74200.1 132 S 132 5 PP
2	B3	51.9	1.4e-16	290	365	18	99
--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +p+ f++eh +k e++++ l d++ r+Wev + + ++ r lt+GW F +an+LkegD+++F+l+++ + ++v++f++ RWR74200.1 290 VPRCFFREHL-PK-EKTKVFLWDPKEREWEVLF--TPCGHRGSLTAGWCAFSRANDLKEGDVCIFELVRECQ--MRVRIFSS 365 7999***4.33.4469***********..66666677**********************98544..59999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MASGPGKPPP EMSQKLESLL FQSMAPRSRN PPENYQKRVP MFFKFMLPGF SQKLSLPPAF 60 LKHLMGEKCD KAILKSSLGK SWHVKVCGGK ACKWFGDGWF DFVQWHDLQI GECLVFRYDG 120 DMVFYVTIFD KSACEKMLPL VKKDDQDHGN QKGMEDEKRQ PLVLKKDKDN GKQRGQHMST 180 VKFNSFKKIK TEVVELTMDK TYSIGAQEKQ PSTTEETMKA FEEANAFLKA SKFPNFLKIM 240 TKSNAGHCFV LVGECDRQTA AEDFPGDDYV LQRTVHGIDR LKAKTSSENV PRCFFREHLP 300 KEKTKVFLWD PKEREWEVLF TPCGHRGSLT AGWCAFSRAN DLKEGDVCIF ELVRECQMRV 360 RIFSSKRPPS AKSKRQKKRS R

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MASGPGKPPP EMSQKLESLL FQSMAPRSRN PPENYQKRVP MFFKFMLPGF SQKLSLPPAF  60
LKHLMGEKCD KAILKSSLGK SWHVKVCGGK ACKWFGDGWF DFVQWHDLQI GECLVFRYDG  120
DMVFYVTIFD KSACEKMLPL VKKDDQDHGN QKGMEDEKRQ PLVLKKDKDN GKQRGQHMST  180
VKFNSFKKIK TEVVELTMDK TYSIGAQEKQ PSTTEETMKA FEEANAFLKA SKFPNFLKIM  240
TKSNAGHCFV LVGECDRQTA AEDFPGDDYV LQRTVHGIDR LKAKTSSENV PRCFFREHLP  300
KEKTKVFLWD PKEREWEVLF TPCGHRGSLT AGWCAFSRAN DLKEGDVCIF ELVRECQMRV  360
RIFSSKRPPS AKSKRQKKRS R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24700.1	6e-17	B3 family protein