PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR74203.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Protein Properties

Length: 389aa MW: 44773.9 Da PI: 10.0826

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR74203.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.6	2.2e-18	137	225	2	99
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 fk+l ++++ +++p f+++ +gk + + +l+ ++g++W vk+ ++ g+ ++ kGW++Fvk+n L++g+f+vF++d++s+f v++f k RWR74203.1 137 FKIL--LGDFTEK-IRIPPAFTKNLNGK-VIN-ESILRCPNGKVWPVKV--KQDAGHLFFHKGWQDFVKDNSLEAGEFLVFRYDENSGF--DVQIFGK 225 5666..5555555.99****776544.343.6799********..9******************************99999..9999976 PP
2	B3	42.1	1.6e-13	310	386	16	98
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + +p +f++eh++ k+ t ++d+sg+ W v++ + +r +++GW +F n+L egD ++F++++ v+++r RWR74203.1 310 VLIPTSFMKEHNLGKK--HTRFFRDPSGKLWPVNI--IHSCNRSDFGSGWHDFRVGNNLGEGDRCIFEFMEG--DVIQVHIIR 386 68*******76643..3789*********..555555569********************8753..334666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MVINRIAFHI QLPGPMLIFN ITTVPTECWM KNIPSEFRKA SQNQQNDHYK PGSSLWRAKV 60 CLQASTLLIF LFSVVRDISY FLHLSSPEDY LSSPQMKKEV FIDIGISDCK NLPFYLSPSI 120 QMARQSEQVS VRIPCFFKIL LGDFTEKIRI PPAFTKNLNG KVINESILRC PNGKVWPVKV 180 KQDAGHLFFH KGWQDFVKDN SLEAGEFLVF RYDENSGFDV QIFGKSGCEK LGSLLHNKVQ 240 KRHKFISVCQ CRYTYRPVVS AKESGGNSLL KERTAVGVRT KRVFNGNACP LKLKHPHFTA 300 RWKLRKPYTV LIPTSFMKEH NLGKKHTRFF RDPSGKLWPV NIIHSCNRSD FGSGWHDFRV 360 GNNLGEGDRC IFEFMEGDVI QVHIIRDEK

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MVINRIAFHI QLPGPMLIFN ITTVPTECWM KNIPSEFRKA SQNQQNDHYK PGSSLWRAKV  60
CLQASTLLIF LFSVVRDISY FLHLSSPEDY LSSPQMKKEV FIDIGISDCK NLPFYLSPSI  120
QMARQSEQVS VRIPCFFKIL LGDFTEKIRI PPAFTKNLNG KVINESILRC PNGKVWPVKV  180
KQDAGHLFFH KGWQDFVKDN SLEAGEFLVF RYDENSGFDV QIFGKSGCEK LGSLLHNKVQ  240
KRHKFISVCQ CRYTYRPVVS AKESGGNSLL KERTAVGVRT KRVFNGNACP LKLKHPHFTA  300
RWKLRKPYTV LIPTSFMKEH NLGKKHTRFF RDPSGKLWPV NIIHSCNRSD FGSGWHDFRV  360
GNNLGEGDRC IFEFMEGDVI QVHIIRDEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	1e-21	B3 family protein