PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR74213.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 254aa    MW: 29375.2 Da    PI: 6.0563
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR74213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM119.92.4e-37141392128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 p G+rF Ptdeel+  yLk+k+++ +l++ +vikev++y+++P++L +++ + +e+++yfF+++ +ky++g++++r+t++g+Wka g   e+++++++l
  RWR74213.1  14 PCGYRFCPTDEELLLVYLKRKLHNLPLPC-DVIKEVELYEFDPNELLAQFGSmREEKCYFFTSTYRKYPKGNQTRRSTNNGFWKA-GAAIEIKDERNNL 110
                 89***************************.99**************855444267799*************************96.7889****9**** PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 +g+k++L+f+  ++p+g+kt+W+m ey+l
  RWR74213.1 111 IGTKRSLAFHFRKHPHGNKTNWIMYEYKL 139
                 ***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MFCAATTSTS MRIPCGYRFC PTDEELLLVY LKRKLHNLPL PCDVIKEVEL YEFDPNELLA  60
QFGSMREEKC YFFTSTYRKY PKGNQTRRST NNGFWKAGAA IEIKDERNNL IGTKRSLAFH  120
FRKHPHGNKT NWIMYEYKLY EDQSVNHVQI STDPMKLEEW VLCSIYENSS ATERESRKRK  180
AIVLSEELDT SSKEREIVLQ QGPLSGNQDN EQSMVPLFDN LPAEPRPNAF DVGFDTGPIS  240
EAAWKSFMDT LNAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-40NAC family protein