PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR74467.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 249aa    MW: 28294.7 Da    PI: 6.8631
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR74467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM140.97.6e-44151401128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 
                 lppGfrFhPtdeel+ +yL++kv + +l+  ++i+e+ ++y+++PwdLp     +e+e yfFs + +k ++ +++n++t+sgyWkatg++k++++  ++
  RWR74467.1  15 LPPGFRFHPTDEELILQYLRRKVFSCPLPS-SIIPEIdHLYNYDPWDLP---GDSEEEKYFFSIQGTKCSNANHHNKTTQSGYWKATGSEKQIVACrSK 109
                 79**************************99.88****669*********...3467899*********************************9986477 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 ++vg+kk++vfy g++p+ +ktdW+mhey l
  RWR74467.1 110 QVVGMKKVFVFYIGNHPNVSKTDWMMHEYCL 140
                 88***************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MENVDNLARN EMMRLPPGFR FHPTDEELIL QYLRRKVFSC PLPSSIIPEI DHLYNYDPWD  60
LPGDSEEEKY FFSIQGTKCS NANHHNKTTQ SGYWKATGSE KQIVACRSKQ VVGMKKVFVF  120
YIGNHPNVSK TDWMMHEYCL LDAGSRACIF TQRENSTQNS IKQMDNWVLY RIFAKKRSTV  180
NAETTQPPRD DNDNSRVEPH GVATKGLIDF MGGQKADLGS PSLSSSSNFS CITELSSSTR  240
SINEENSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.17e-62NAC family protein