PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR74489.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TCP

Protein Properties

Length: 298aa MW: 32160.9 Da PI: 7.3964

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR74489.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.2	3.4e-39	55	145	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg...k 89 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg+++ +as + a++ss+s++ s + + RWR74489.1 55 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTMPASMFAAAASSVSEQGTSVSaglH 145 789*************************************************************999997774444444444333332441 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MDPKAPKLPQ EVPRFHQALG LPQPEMREED TDPHPHDREL QIVVAEKDDS KKQLAPKRSS 60 NKDRHTKVEG RGRRIRMPAL CAARIFQLTR ELGHKSDGET IQWLLQQAEP SIIAATGSGT 120 MPASMFAAAA SSVSEQGTSV SAGLHQKMDE LGPGIGSSNR SNWSMIGTNS FRPQVGPGMW 180 PPVGAFGSTG FFHQSGPSTS NLGNENSNFM QRMGLHGFEL QGSNLGSFSP TLILGGNNQQ 240 LPGLELGLSQ DGHIGVLNTQ ALSQFYQQLG QGREVGHTQP PQQPPPPPTK DDSQGSRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	8e-70	TCP family protein