PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR74508.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 183aa MW: 20854.5 Da PI: 10.0393

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR74508.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.1	3.1e-32	104	162	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk++++prsYYrCt +gC+vkk+v+r ++d+ vv++tYeg H+h+ RWR74508.1 104 LDDGYRWRKYGQKAVKNNKYPRSYYRCTNQGCNVKKQVQRLSKDEGVVVTTYEGIHTHP 162 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MENCQILFPS SASSSSFPPF HLIAPFSNNM APPNVLTNFH QNRNGLLGFK TGVDNQPSID 60 NNTSPMERTA AGSENEMKPG KKKGEKKVRK PRFAFQTRSQ VDILDDGYRW RKYGQKAVKN 120 NKYPRSYYRC TNQGCNVKKQ VQRLSKDEGV VVTTYEGIHT HPIEKSTDNF EHILSQMQIY 180 SGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	2e-56	WRKY family protein