PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR74633.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

C2H2

Protein Properties

Length: 983aa MW: 105544 Da PI: 4.5706

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR74633.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0014	20	42	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++Cg +F++++ +H r H RWR74633.1 20 HICHKCGWTFPNPHPSAKHRRAH 42 68*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 983 aa Download sequence
METEEKGKTH PPGHETHSVH ICHKCGWTFP NPHPSAKHRR AHKKVCGKID GLQLIYHQDK 60 ANSNEDVSDD DHDPSEGHDE TSSSRTEVQG VKRPKEEVLY LNRLLFDSIE PIVGGLRDKG 120 GEVQGEIMDA RSSQVAEVTA VAAQEPDHDL ENSTSESTVI LQPNDLMQGS QIRNPNASES 180 ETVNLDSGTH VQGHALPSTV GRSISDINAG SLVLEPEAKA PPSEPVIPAF DNAGHSNIDT 240 DEVVELSMTE IGPNLDAEGD DNNARAENPP SVCMLPDIST SDFSEIDSKL HKMGELTEMG 300 VPSNLPNASI EDARAASSKD MVVDFKEPNT SGRQNLQNEK SPTIHLASTE TEGDEYQGGL 360 VGTAKVPGGG LQVDSKQEVN AENQGDMVEG CDQPGKLEKN PPSSTSEHIL VQNVSETTPE 420 FHEDNVLAPQ KVSLTSSIDE AIGSTNILKH AVEQEADSGS MLVKSIKMEA ILTLSKQVQE 480 DSIRVDEKGS KTTQEEFIVN ENGLDGDRID GGSQFMGLDS DGCAVEGLHS DELEVHPGTS 540 NRESILNKAT NPIAMVVGSS KLDATGNHLE ENKLDCSFGE LVPHHGLAHE ILPGTLVDDA 600 AGGSTSCSGI GSIVCNETAM DSGGYGAADK EFRDDQKDYS QERTKARDSP SSTEIEEQVG 660 QNDTDNQLSG DLRQELKSNQ GSVVGLNQLD MKNPTSEEHA CSSSRSLENC SSRHSAQGRG 720 SDSHFHSVQE GGDDNILKHN SNASALSMDA SVNSISQTGT DSIGGYWGSV SDGTVPPTRD 780 ATYAPTLLKV EAAPNISIQT STESSDAALK EHRADSTELF EAPSFMTLVE PVKDINRQSA 840 SPESHSNQKP QSPNSPSQAG WFPSLTNVVN DSQGRKKNEE IIAKVVNWSS GKTRTSLSRL 900 LVEANLDSKH KSETAPEHAA SMTREGQVSR DIRPPGKTTT KNSTPSTAKG VTNKEYSSPA 960 RLPVTKKEKR KIWFPFTCCP SIN

Sequence ? help Back to Top

Protein Sequence Length: 983 aa Download sequence

METEEKGKTH PPGHETHSVH ICHKCGWTFP NPHPSAKHRR AHKKVCGKID GLQLIYHQDK  60
ANSNEDVSDD DHDPSEGHDE TSSSRTEVQG VKRPKEEVLY LNRLLFDSIE PIVGGLRDKG  120
GEVQGEIMDA RSSQVAEVTA VAAQEPDHDL ENSTSESTVI LQPNDLMQGS QIRNPNASES  180
ETVNLDSGTH VQGHALPSTV GRSISDINAG SLVLEPEAKA PPSEPVIPAF DNAGHSNIDT  240
DEVVELSMTE IGPNLDAEGD DNNARAENPP SVCMLPDIST SDFSEIDSKL HKMGELTEMG  300
VPSNLPNASI EDARAASSKD MVVDFKEPNT SGRQNLQNEK SPTIHLASTE TEGDEYQGGL  360
VGTAKVPGGG LQVDSKQEVN AENQGDMVEG CDQPGKLEKN PPSSTSEHIL VQNVSETTPE  420
FHEDNVLAPQ KVSLTSSIDE AIGSTNILKH AVEQEADSGS MLVKSIKMEA ILTLSKQVQE  480
DSIRVDEKGS KTTQEEFIVN ENGLDGDRID GGSQFMGLDS DGCAVEGLHS DELEVHPGTS  540
NRESILNKAT NPIAMVVGSS KLDATGNHLE ENKLDCSFGE LVPHHGLAHE ILPGTLVDDA  600
AGGSTSCSGI GSIVCNETAM DSGGYGAADK EFRDDQKDYS QERTKARDSP SSTEIEEQVG  660
QNDTDNQLSG DLRQELKSNQ GSVVGLNQLD MKNPTSEEHA CSSSRSLENC SSRHSAQGRG  720
SDSHFHSVQE GGDDNILKHN SNASALSMDA SVNSISQTGT DSIGGYWGSV SDGTVPPTRD  780
ATYAPTLLKV EAAPNISIQT STESSDAALK EHRADSTELF EAPSFMTLVE PVKDINRQSA  840
SPESHSNQKP QSPNSPSQAG WFPSLTNVVN DSQGRKKNEE IIAKVVNWSS GKTRTSLSRL  900
LVEANLDSKH KSETAPEHAA SMTREGQVSR DIRPPGKTTT KNSTPSTAKG VTNKEYSSPA  960
RLPVTKKEKR KIWFPFTCCP SIN