PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR74655.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

HB-other

Protein Properties

Length: 496aa MW: 56634.4 Da PI: 9.6375

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR74655.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.4	5e-18	13	68	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR+ t++q+ +Lee++++++yps+e++ + A klgLte+q++ WF+ rR k+k+ RWR74655.1 13 KKRRLKTPSQVAALEEFYNEHKYPSEEMKSDFALKLGLTEKQISRWFCHRRLKDKN 68 8999*************************************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MHSEEDKLSA EDKKRRLKTP SQVAALEEFY NEHKYPSEEM KSDFALKLGL TEKQISRWFC 60 HRRLKDKNRL KDDACMSGKH DLSNSVLQDR GSGLRQDSCG STKQGDYMHF DPREVESRRF 120 YRQDYPSAVL ASENRGQDKR TKDYGTVSDT SSGSSSGPQD RLLPSRYSSW DSNSMLMNTK 180 GVKGRGYMMA SEYLYLQDEI ENPAISAVKK QLGRRYRPDG PPIGVEFQPL PPGAFDAPLG 240 DSIQDKLQLR LALLKLQSHT MLEILACRIL TASQELRRKT VLAWQAHGIH RYKSYPHGSC 300 TEGSGFRRTV WESDHQKESI SYPSSQRSFT NYYYHGPDKN SVLEMDADSA AEASVFKSNS 360 FRTLSKQRVE QTSISSKGSL RLYDRNINPN NSVLQHSEPL DADDKFNSRK LTKLEQRYLE 420 KRVNKHKTIS NPLRTKTLRQ EMKMGKRGTE FPRLDSTLRT PSQEQPWKKP IKGFAGELPT 480 SFSEDETASS SSSMDC

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MHSEEDKLSA EDKKRRLKTP SQVAALEEFY NEHKYPSEEM KSDFALKLGL TEKQISRWFC  60
HRRLKDKNRL KDDACMSGKH DLSNSVLQDR GSGLRQDSCG STKQGDYMHF DPREVESRRF  120
YRQDYPSAVL ASENRGQDKR TKDYGTVSDT SSGSSSGPQD RLLPSRYSSW DSNSMLMNTK  180
GVKGRGYMMA SEYLYLQDEI ENPAISAVKK QLGRRYRPDG PPIGVEFQPL PPGAFDAPLG  240
DSIQDKLQLR LALLKLQSHT MLEILACRIL TASQELRRKT VLAWQAHGIH RYKSYPHGSC  300
TEGSGFRRTV WESDHQKESI SYPSSQRSFT NYYYHGPDKN SVLEMDADSA AEASVFKSNS  360
FRTLSKQRVE QTSISSKGSL RLYDRNINPN NSVLQHSEPL DADDKFNSRK LTKLEQRYLE  420
KRVNKHKTIS NPLRTKTLRQ EMKMGKRGTE FPRLDSTLRT PSQEQPWKKP IKGFAGELPT  480
SFSEDETASS SSSMDC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	13	18	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	2e-64	HB-other family protein