PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR74789.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 239aa    MW: 26722.3 Da    PI: 9.2237
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR74789.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.27.2e-1468113454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +h+e+E+rRR+riNs ++eLr+llP +      K +Ka+ L ++v+++k+L
  RWR74789.1  68 NHKEAEKRRRERINSHLNELRKLLPCN-----SKTDKASLLARVVQHVKDL 113
                 8*************************8.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MQPANPPGTS EIYRILSQNR MTRVDPYASH TPTRISPGAP NPGPSFLPLE MATITDLPQP  60
RSLSASINHK EAEKRRRERI NSHLNELRKL LPCNSKTDKA SLLARVVQHV KDLKQRTSEI  120
AGSDLLPTET DEIDVFSDEV SGGGRSVFKA SLCCEDRSDL LPDLIETLKS LRLRTIKAEM  180
ATLGGRVRNV LVVAGEDDYF QGDDSVGFLR EALKALVERA ADSERGKRRR MFDRRRTTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.12e-62bHLH family protein