PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR75021.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family TCP
Protein Properties Length: 322aa    MW: 36086.6 Da    PI: 9.5105
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR75021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP128.85.4e-401462904133
         TCP   4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssasec..eaesssssasnsssg... 88 
                  + rhski T++g+RdRR+Rls+++a +fF Lqd+LGfdk+skt+ WLl+++kpaikel ++         s+s ++++  +          ++ +   
  RWR75021.1 146 NRERHSKIITAQGLRDRRMRLSVDVAHEFFGLQDKLGFDKASKTVAWLLRKSKPAIKELYKSkssrraypySTSESEDMsgT----------DETTypv 234
                 689***********************************************************54444443322222222221..........1111334 PP

         TCP  89 ..........kaaksaa.kskksqksaasalnlakesrakarararertrekmrik 133
                           k+   ++ k+  +++++a+   +a+esra ara+arert+ekm ++
  RWR75021.1 235 vdqqdedlkqKSLVPTPsKKGIQESQKATYCPIARESRAIARAKARERTKEKMTKS 290
                 4444455666555555557888888889999**********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MCSKPPMENN LSTWSMGCNQ QRQMFPSNHG TIPYTFAEQC LFGHHTFPKD EPPSSFHFSP  60
SLNHSNQVLA YNHELLSRQF TQFSHLPAAG NVITSVVGDG ACYAAAASMK GSVATGMVSS  120
STTQNLSPNK TSPFCPKAAG RKRNSNRERH SKIITAQGLR DRRMRLSVDV AHEFFGLQDK  180
LGFDKASKTV AWLLRKSKPA IKELYKSKSS RRAYPYSTSE SEDMSGTDET TYPVVDQQDE  240
DLKQKSLVPT PSKKGIQESQ KATYCPIARE SRAIARAKAR ERTKEKMTKS DIMDFPENWD  300
MDSARTRSSC CDTPNMHLFT DF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.29e-27TCP family protein