PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75023.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 247aa MW: 28455.5 Da PI: 5.5195

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75023.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.3	1.2e-15	8	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll ++++++G g W++++ + g++R+ k+c++rw++yl RWR75023.1 8 KGAWTEEEDILLTKCIEKFGVGKWSRVPLMAGLRRCHKSCRLRWLNYL 55 79********************************************97 PP
2	Myb_DNA-binding	49.1	1.3e-15	61	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l+++++k+lG++ W++Ia +++ gRt++++k++w+++l RWR75023.1 61 RGEFKEDEVDLIIKLHKLLGNR-WSLIAGRLP-GRTANDVKNYWNSHL 106 8999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MEHLGVRKGA WTEEEDILLT KCIEKFGVGK WSRVPLMAGL RRCHKSCRLR WLNYLKPDIK 60 RGEFKEDEVD LIIKLHKLLG NRWSLIAGRL PGRTANDVKN YWNSHLSKRI SMQKGEQSQI 120 KSMETTAIAT TKVIRPQPRT FSPNSKWLSG TAGSSTIQTE LQKMPNNAMM GSPQEESALW 180 WKSLLGDGEE EEEEEDTWWS KSGKFGLEVE LPQIFGVEEM EKMEKKEEEG LGEWDNMLLD 240 FDLLSEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	3e-63	MYB family protein