PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75024.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 253aa MW: 29235.6 Da PI: 8.9036

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75024.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.8	2.8e-14	8	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll ++++++G g W+ ++ + g++R+ k+c++rw++yl RWR75024.1 8 KGAWTEEEDILLTKCIEKFGEGKWRQVPFKAGLRRCHKSCRLRWLTYL 55 79********************************************97 PP
2	Myb_DNA-binding	45.9	1.3e-14	61	105	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg + ++E +l+++++k+lG++ W++Ia +++ gRt +++k++w+ + RWR75024.1 61 RGEFEEDEIDLIIRLHKLLGNK-WSLIAGRLP-GRTSNDVKNYWNCH 105 7999****************.*****.*********977 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MEHLGVRKGA WTEEEDILLT KCIEKFGEGK WRQVPFKAGL RRCHKSCRLR WLTYLKPGIK 60 RGEFEEDEID LIIRLHKLLG NKWSLIAGRL PGRTSNDVKN YWNCHLSRRL TMQKGAQSQI 120 KSIKTTTANA AVATKIIRPK PHSFSPNSKW LSRAGPSTIA TQVPKMSNNP VPESPQEEST 180 LWWKSLLAYV DEEDNTWWPK STEVGQEKDL PQSFVVEEME GMRKEEDRVT MEKELGELDN 240 MLLDVDLWGL FKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	2e-60	MYB family protein