PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR75025.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 190aa    MW: 21269.3 Da    PI: 9.8643
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR75025.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding271e-0817412248
                     T-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqkyl 48
                     + W++Ia +++ gRt++++k++w+++l
       RWR75025.1 17 K-WTLIAGRLP-GRTANDVKNYWNSHL 41
                     4.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MKWISSSGFI SSWAIGKWTL IAGRLPGRTA NDVKNYWNSH LSRRLSMKKG VQSHIKSMKA  60
TTTTTTTTKI IRPQPRTFSP NSKWLHGIGS SIVEAQLKQM SNNAIMPGSP QEESALWWKS  120
LLAEEEKEDT SWSKAVEVGK EEALPLSFEM EEMERLRKEG DGLMMEGGGL GRLPGRTAHD  180
IKELLELSPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.12e-17MYB family protein