PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75028.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 252aa MW: 29208.4 Da PI: 8.3284

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75028.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.3	5.4e-16	8	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll +++++ G g W+ ++ + g++R++k+c++rw++yl RWR75028.1 8 KGAWTAEEDILLRKCIEKCGEGKWRQVPMRAGLRRCRKSCRLRWLNYL 55 79********************************************97 PP
2	Myb_DNA-binding	48	2.9e-15	61	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l+++++k+lG++ W++Ia +++ gRt++++k++w+++l RWR75028.1 61 RGEFEEDEVDLIIKLHKLLGNR-WTLIAGRLP-GRTANDVKNYWNSHL 106 79999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MEHLDVRKGA WTAEEDILLR KCIEKCGEGK WRQVPMRAGL RRCRKSCRLR WLNYLKPNIK 60 RGEFEEDEVD LIIKLHKLLG NRWTLIAGRL PGRTANDVKN YWNSHLSKRQ SMQKGEQSQI 120 KSMKPTTTTT TTTATKIIRP KPRTFSPNSL WLNGVGSSIV EAQLQKMSNN TMPASPGEDS 180 TLWWKSLLAD MEEDTWWSKS GEVRVEEELP HSSGVEEMER IRKQGDEPMT ERELGEWDNM 240 LLDVDLWGLL ET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	2e-62	MYB family protein