PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75029.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 260aa MW: 30004 Da PI: 8.0972

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75029.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.1	7.4e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd ll ++v+++G g W++++ + g++R++k+c++rw+++l RWR75029.1 14 KGAWSEEEDILLRKCVEKYGEGKWRRVPMRAGLRRCRKSCRLRWLNHL 61 79********************************************97 PP
2	Myb_DNA-binding	27.9	5.4e-09	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g + ++E +l+++++k+lG+++ ++ ++++ gRt++++k++w+++l RWR75029.1 67 KGEFEEDEVDLIIKLHKLLGNRQVDS-HSRLP-GRTANDVKNYWNSHL 112 68999***************7766.66777.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MGRFSGMEHL DVRKGAWSEE EDILLRKCVE KYGEGKWRRV PMRAGLRRCR KSCRLRWLNH 60 LKPNIKKGEF EEDEVDLIIK LHKLLGNRQV DSHSRLPGRT ANDVKNYWNS HLSKRQSMQK 120 GEQSQIKSMK PTTTTTTTTT TATKIIRPKP RTFSPNSLWL NGVGSSIVEA QLQKMSNNTM 180 LASPGEESTL WWKSLLADVE EDNWWSKSGE VGVEEELPHS SGVEEMERIR KQGDEPTTER 240 ELGEWDNMLL DVDLWGLLET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	1e-55	MYB family protein