PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR75098.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C2H2
Protein Properties Length: 249aa    MW: 27191.3 Da    PI: 6.3441
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR75098.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00033103125123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  RWR75098.1 103 FSCNYCQRKFFSSQALGGHQNAH 125
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MKPHNSKFEA EVTSEDESDI SSQVASNISV QETSPHPSLD PIISAPADLI NQQTPESISL  60
DLTLKCNNIH EFGRKESGGF SLASTSESSS DAHPPSTATP RVFSCNYCQR KFFSSQALGG  120
HQNAHKRERT LAKRAMRMSV LSERYASLAS LPLHGSACRS LGIKAHSLVH GGAMERPDTR  180
GGARFEHRFI GLPVFVEDDE TDMYWPRSFR QVTAGSPSFE MAGSSNLNFV SMAPPPEEDL  240
SAPDLTLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.11e-43C2H2 family protein