PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75173.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 264aa MW: 29335 Da PI: 8.5854

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75173.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48	2.9e-15	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ Ed++l +++ +G g W+ Ia++ g++R++k+c++rw++yl RWR75173.1 18 KGAWSVTEDKILHTYITTHGEGKWREIAERSGLKRCGKSCRLRWLNYL 65 79********************************************97 PP
2	Myb_DNA-binding	48.1	2.8e-15	71	115	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T +E++l+++++k+lG++ W++Ia +++ gRt+ ++k++w++ RWR75173.1 71 RGNITHDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDTEIKNYWNSN 115 7999****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MNRSMGRSPS CSKGEVNKGA WSVTEDKILH TYITTHGEGK WREIAERSGL KRCGKSCRLR 60 WLNYLRPGIK RGNITHDEED LIIRLHKLLG NRWSLIAGRL PGRTDTEIKN YWNSNLSKKV 120 QQYHNKSQEN EQPGTAPSGK KSQARPPIRT KATRCTKVVL PPQQQGQVAK DLDGGSLSKL 180 HEDGNSSVCF KDLDMGTLLS LDIQDSNAAN LGRNGIPEHG GGVYGDDDDC SAWISLNLPF 240 LLEDKMLENW GISDDLQAIG ESGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	1e-60	MYB family protein