PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75174.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 295aa MW: 33618.6 Da PI: 5.1537

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75174.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.6	9.3e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+++Ed +l +++k +G g W+ +++ g++R++k+c++rw++yl RWR75174.1 14 RGAWSAQEDRILTNYIKTHGEGKWRDLPKKAGLRRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	53.3	6.2e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ ++eE++l+++++k+lG++ W++Ia +++ gRt++++k++w++ RWR75174.1 67 RGNISPEEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTC 111 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MGRKPCCSKE GVNRGAWSAQ EDRILTNYIK THGEGKWRDL PKKAGLRRCG KSCRLRWLNY 60 LRPDIKRGNI SPEEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEVKNYWNT CLSKRMVKGH 120 SLNTSSQEQI KTRSQERRPS LDTSAEAPLM ECQPHQVIRT KAVRCTKVFL PPEQGDPLRE 180 RDTEPGDNEI PLLVNPQGDD CLNFLMDFDM GEAFLSDNIL DTDYVPAFGD EIQEKSSRDN 240 DGDDGGHNFL SSFDEHFSFS EAVLDDWKDS NSIQDDVGLG FDFSDLPSWI IKEAC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	1e-61	MYB family protein