PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75176.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 214aa MW: 24163.2 Da PI: 8.0894

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75176.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.6	3e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l ++++ +G ++W++++++ g++R++k+c++rw++yl RWR75176.1 14 KGAWTPEEDRKLSECIQIHGEKRWRLVPAKAGLNRCGKSCRLRWLNYL 61 79********************************************97 PP
2	Myb_DNA-binding	51.3	2.7e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l RWR75176.1 67 RGNISDQEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 112 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MAPNGGSVEM ELNKGAWTPE EDRKLSECIQ IHGEKRWRLV PAKAGLNRCG KSCRLRWLNY 60 LRPNIKRGNI SDQEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNS HLSKRVGGAR 120 NEKKGPKSHN STALEKNLGE VLKGPSWKDG DVSTNEFNVD ELIQSQEDVR VGIPLDSPEK 180 EEGMERFGGS VGSNKGHLGW DWVRELLEFD EGVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	3e-53	MYB family protein