PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR75504.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 238aa    MW: 26325.4 Da    PI: 8.1974
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR75504.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.97.1e-20105153355
         AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++ a+++l+g
  RWR75504.1 105 YRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDSAARRLRG 153
                 9*******.**********32....25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
METTALSFFI RPELFELADS PDPLRFLTEP TSDLPFCYTP PLLTSDSEDS EPVLEGIAAV  60
VGRNILFGQD NTNPSPSTET PTQETGTEKR EPVGDVGSVS GQRNYRGVRK RPWGRWSAEI  120
RDRIGRCRHW LGTFDTAEEA ARAYDSAARR LRGSKARTNF SIPSSFYIPL PVGSPASSSM  180
AMEKKKQVGQ TRRSSASVTS IANLFSPESE ERRRQVKLEL DLKLGLAFSN STDASSMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.15e-25ERF family protein