PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR75714.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family E2F/DP
Protein Properties Length: 352aa    MW: 39173.6 Da    PI: 7.0211
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR75714.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.42.1e-2799180371
     E2F_TDP   3 eksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 +++Lr++++k   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  RWR75714.1  99 GRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEftdpssslaspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 180
                 689*******...*****999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MLICGNQQED EEKNPISFSR GATRSWGTTI SGQSISTSGS AGSPSSRSEP TMVPPAVCDN  60
TSVQLNQMDS QGDDAVSQGA FGSKKKKRGA RAVGNDKGGR GLRQFSMKVC EKVESKGRTT  120
YNEVADELVA EFTDPSSSLA SPDQQQYDEK NIRRRVYDAL NVLMAMDIIS KDKKEIQWKG  180
LPRTSLNDVE ELKAERIGLR NRIEKKTAYL KELEDQFIDL KNLVQRNEQL YGSGNAPSGG  240
VTLPFILVQT RPHATVEVEI SEDMQLVHFD FNSTPFELHD DAYVLKAMRS RENEQNDTPH  300
ESTSNGGESS RIPSLYQHHH IPHSSRSNTI GKWPNSPRVP GILKATRVKH EQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-137E2F/DP family protein